Recovering power in association mapping panels with variable levels of linkage 1 disequilibrium

R. Rincent, L. Moreau, H. Monod, E. Kuhn, A.E. Melchinger, R. A. Malvar, J. Moreno3 Gonzalez, S. Nicolas, D. Madur, V. Combes, F. Dumas, T. Altmann, D. Brunel, M. 4 Ouzunova, P. Flament, P. Dubreuil, A. Charcosset, T. Mary-Huard 5 6 UMR de Génétique Végétale, INRA – Université Paris-Sud – CNRS, 91190 Gif-sur-Yvette, 7 France, 8 BIOGEMMA, Genetics and Genomics in Cereals, 63720 Chappes, France, 9 KWS Saat AG, 37555 Einbeck, Germany, 10 Limagrain, site d’ULICE, BP173, 63204 Riom Cedex, France, 11 INRA, Unité de Mathématique et Informatique Appliquées, UR 341, 78352 Jouy-en-Josas, France. 12 Institute of Plant Breeding, Seed Science, and Population Genetics, University of Hohenheim, 13 70599, Stuttgart, Germany, 14 Misión Biológica de Galicia, Spanish National Research Council, 36080 Pontevedra, Spain, 15 Centro de Investigaciones Agrarias de Mabegondo, 15080 La Coruna, Spain 16 Max-Planck Institute for Molecular Plant Physiology, 14476 Potsdam-Golm, Germany, 17 Leibniz-Institute of Plant Genetics and Crop Plant Research (IPK), 06466 Gatersleben, Germany, 18 INRA, UR 1279 Etude du Polymorphisme des Génomes Végétaux, CEA Institut de Génomique, 19 Centre National de Génotypage, CP5724, 91057 Evry, France. 20 11 INRA/AgroParisTech, UMR 518, 75231, Paris, France 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 Genetics: Early Online, published on February 14, 2014 as 10.1534/genetics.113.159731